Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015827801.1_cds_XP_016503211.1_16777
CDS Infomation

[gene=LOC107821289] [db_xref=GeneID:107821289] [protein=zinc finger CCCH domain-containing protein 17-like] [protein_id=XP_016503211.1] [location=complement(join(161772..163670,163828..163938,165560..165709))] [gbkey=CDS]
Sequence

ATGGTGGGTCCTACACCGCCGCAGCGGCAGCTACAAATTCAGACACTTTCTACGGCGGCG
GCGCCAACCACGTTATCAGCTGAAGATGAAGCTCTTAAACGAAACACTGATTGCGTCTAC
TTCCTCGCTTCTCCTCTTACATGCAAAAAGGGAAGCGATTGTGAATACCGCCATAGTGAC
GTAGCTCGGCTTAATCCTCGAGATTGCTGGTACTGGTTGAATGGAAGCTGCTTAAACCCA
AAGTGCGGTTTCCGGCACCCTCCGCTTGATGGATTTTTGGGAGCGCAAGTTCAAACTCCT
ACAGGATCTTCTGTACCTCCAGTGGCATCTGTTGCACCTACACCAAATTTTCTATATGGT
TCTGGTAAGCAAGGTGTGCCCTGTATATTCTTCCAGCAAGGCTTCTGTTTAAAAGGTGAT
AGGTGTCCGTTCTTCCATGCACCGATCTCTGTATCTAACAAAGCCCCACCCCATCCTGTA
TCTACTGCATCTACTGAGAAAACCCCTTTTAAGAAGGCATTTGGTGGGCTTGAAAAGTGT
GTGCAAGGAAAGACATTTTCTCAAGCAAATACTTGGAAGTCTGGGGAATTGCCTGTACAA
ACACAACCAGTTGGGAAGCTGGGAACTCATTTGTCCAAGAATGATGCTGCCTTTAATGAG
AATGTGCTGCCACCAAATTCTGTCATTGATGTTGTGCATCACAGGCACAAACCAAAAAGT
GTGCCTCCTACGAATGGAAATCCTATTGGTAGGTCCAACAGAGTGCAGCAGTCTGTCAGG
TTTGATGATCACAGCAGCATTCAGAACAAGGATGATGAGATTTCAAGGGAGCTTTCACCT
GGTTTTGATGTTCTTGTGGATGATGAGCTAAGAGGTAATGCTTTCTATCAAGCTGAAGAT
CAGTATGGCAGAAATGAGGGGAGGAATGAATACGATATTGGCCACTCTGCCGATTACACT
TCAGTAGCAGATATTGACCAAGATGCGTACCATGATGTGTATGGGCGTGACTCTCACGAC
AGGCTTCCGGGTCGCTCTGGTAGGGTGCAGCATAGAGCTTCTTCTGAGAGAATACAAGGG
AAATCAGCTCATCTTGAAAGGAGACGCCATGGTAGAGCGTACAGCCCTGAAGAAGTTCGA
GAGTCAGATTTGAGACATCGTTTATCAAAGCATAAGAGGGTTAATGGTTTGAGGTCGGTC
ATTAGTCATGATTATGCAAGTGAAAAGCATGCTGACGATCGAGGCTACCAGAGTTCCAGG
AGGGATCGACACCATTTACCGTCACATGATAGTTCCGTTGCTAGTCGTCTTCGAGGAAGA
ATAAAGCTACCAAGTAGACCATCCTCTCCAACTAATGGGACGGGCATGCGGTTAGATAGG
GATATGGATAGGGCTAGAGACCGTGGCAGGTTATCTTTAGAAAGGCCACAGCTTTTCTCT
CAACAGGGAAGGCTTCGAGATAGAATAAAGGGAAGAGTGCAGGAGGATCTCAATAATGCT
GGAAGAAATAACAGTGGTCCACGCCTAAGAAGAGATATAAGTGAGAATGATTCTGATTTT
TCTGGTCCACGAAGTCTTGCAGAACTTAAAGGTCGTAAAACTGCTGAGACCAGTGAACAA
AATGTCAACGAGCAACAGGCCCTAGGGAAGCGTAAGTTCCAAAAGCGTGATGGCTATCAG
CAAACTGGAGGCGATCTATCATTTGAAGGACCAATGCCTCTTCAAGAGATCCTGAAGAGA
AAAAGAAGTGAAACGGGCATGAAATCTGTTAAGAGTGAAGACTATCAACATGAAAGAAAA
GCCCACTCATTGGTAACTTCCTCTATCTCCAGGAGCGGGTCTGACCTTGGGCAAAAGGAA
GAATCTGATCCTGCATCAGGTGAGAAAAATGGGTTTCAAGAGACAATAGCAGCTGGTCAT
CAATCTCCTGTGCACCATGGTGCAAATGAATTTGAAGCTGAAGAAGGGATGCTTGTGGAA
GAAGAAGATGATCAAGACCCCGAAGGTCATGATCAGATAGATTATGATTATGAGCAGGTT
GATGGTGAAGACTACAATTTAGATGAAGGCGAGAATGCTGACGCTGGTGAGGAATACCTG
AATGAAGATGACGATGATGGAGATGACTTTGCAAAGAAGATGGGCGTTGTTTTCTCGTAA

Peptide Sequence

PEP ID

XP_016503211.1
PEP Infomation

PREDICTED: zinc finger CCCH domain-containing protein 17-like [Nicotiana tabacum]
Sequence

MVGPTPPQRQLQIQTLSTAAAPTTLSAEDEALKRNTDCVYFLASPLTCKKGSDCEYRHSD
VARLNPRDCWYWLNGSCLNPKCGFRHPPLDGFLGAQVQTPTGSSVPPVASVAPTPNFLYG
SGKQGVPCIFFQQGFCLKGDRCPFFHAPISVSNKAPPHPVSTASTEKTPFKKAFGGLEKC
VQGKTFSQANTWKSGELPVQTQPVGKLGTHLSKNDAAFNENVLPPNSVIDVVHHRHKPKS
VPPTNGNPIGRSNRVQQSVRFDDHSSIQNKDDEISRELSPGFDVLVDDELRGNAFYQAED
QYGRNEGRNEYDIGHSADYTSVADIDQDAYHDVYGRDSHDRLPGRSGRVQHRASSERIQG
KSAHLERRRHGRAYSPEEVRESDLRHRLSKHKRVNGLRSVISHDYASEKHADDRGYQSSR
RDRHHLPSHDSSVASRLRGRIKLPSRPSSPTNGTGMRLDRDMDRARDRGRLSLERPQLFS
QQGRLRDRIKGRVQEDLNNAGRNNSGPRLRRDISENDSDFSGPRSLAELKGRKTAETSEQ
NVNEQQALGKRKFQKRDGYQQTGGDLSFEGPMPLQEILKRKRSETGMKSVKSEDYQHERK
AHSLVTSSISRSGSDLGQKEESDPASGEKNGFQETIAAGHQSPVHHGANEFEAEEGMLVE
EEDDQDPEGHDQIDYDYEQVDGEDYNLDEGENADAGEEYLNEDDDDGDDFAKKMGVVFS

Transcript Sequence

Gene sequence data has not been registered.